269348 pyrophosphatase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269348 chr_8 pyrophosphatase 495447 496551 + pyrophosphatase

Synonyms

NCBI ID Ensembl Genomes exon ID
7450156 Thaps269348.2, Thaps269348.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0185
 0.25

Most Highly Correlated Transcripts

bd218

(bd218) Chloroa_b-bind superfamily
0.9803

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9776

bd1820

(bd1820) Fasciclin
0.9738

bd1306

(bd1306) NA
0.9695

bd1863

(bd1863) NA
0.9504

bd1645

(bd1645) tpt
0.9502

bd1403

(bd1403) NA
0.947

bd1765

(bd1765) NA
0.9437

bd1387

(bd1387) psbE
0.9398

bd1342

(bd1342) psaL
0.9373

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pyrophosphatase cl00217 196.928 100 - 275 specific 238239
pyrophosphatase superfamily - 196.928 100 - 275 superfamily 260270

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14529 PHATRDRAFT_14529 219585 196141 439901 Cre10.g424100.t1.2 Not available 319228

KEGG

KEGG description KEGG Pathway
Oxidative phosphorylation map00190

GO Terms

GO:0000287 GO:0008152 GO:0016462 GO:0004427 GO:0005737 -

GO:0000287

magnesium ion binding

Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016462

pyrophosphatase activity

Details: 
Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments.
GO Category: 
MF

GO:0004427

inorganic diphosphatase activity

Details: 
Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

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