27003 MetAP1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27003 chr_2 MetAP1 610073 611308 - MetAP1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448695 Thaps27003.3, Thaps27003.2, Thaps27003.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0190

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9294

30701

PRK05279
0.921

262926

PLN02788
0.9168

36007

Aldolase_II superfamily
0.9167

37642

nascent-polypeptide-associated complex alpha polypeptide-like protein
0.9125

36419

RabGAP-TBC
0.9093

35136

NA
0.9022

261490

HemK
0.9015

4680

hypothetical protein
0.9008

13794

WD40
0.897

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M... cl00279 359.114 3.88E-125 1 - 237 specific 238519
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 359.114 3.88E-125 1 - 237 superfamily 260321

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd561 PHATRDRAFT_bd561 224799 299092 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008235 GO:0004239 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008235

metalloexopeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004239

NA

Details: 
NA
GO Category: 
NA

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