27220 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27220 chr_2 hypothetical protein 2017620 2019206 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452494 Thaps27220.1, Thaps27220.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0365

Most Highly Correlated Transcripts

1986

MATE_like superfamily
0.8433

268929

PLN02885
0.8369

22957

hypothetical protein
0.8285

25944

p450 superfamily
0.8281

264420

PseudoU_synth_EcTruA
0.8252

19764

MPC superfamily
0.8207

270222

0.8147

8510

hypothetical protein
0.8142

2799

hypothetical protein
0.8114

28413

BglB superfamily
0.8098

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47448 PHATRDRAFT_47448 180802 198571 250066 Cre03.g193700.t1.1 AT3G61540.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0003700 GO:0005634 GO:0006355 GO:0016804 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0016804

NA

Details: 
NA
GO Category: 
NA

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