28413 BglB superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28413 chr_5 BglB superfamily 1900337 1902075 + BglB superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444876 Thaps28413.1, Thaps28413.3, Thaps28413.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0122

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0152
 0.38

Most Highly Correlated Transcripts

7471

O-FucT_like
0.8951

264420

PseudoU_synth_EcTruA
0.8898

31052

S_TKc
0.8886

25565

hypothetical protein
0.8758

268460

PolY superfamily
0.8757

10474

hypothetical protein
0.875

10564

DadA
0.8717

261158

calcium channel
0.8683

21893

CysPc
0.8669

262956

WASH-7_mid
0.8661

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BglB superfamily Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and... - 435.119 1.98E-149 21 - 437 superfamily 260762

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16856 PHATRDRAFT_16856 184113 320816 68714 Cre07.g320850.t1.2 AT5G36890.1 332698

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004553 GO:0005975 GO:0015926 GO:0008422 -

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

Details: 
Catalysis of the hydrolysis of any O-glycosyl bond.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0015926

glucosidase activity

Details: 
Catalysis of the hydrolysis of glucosyl compounds, substances containing a group derived from a cyclic form of glucose or a glucose derivative.
GO Category: 
MF

GO:0008422

beta-glucosidase activity

Details: 
Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.
GO Category: 
MF

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