27773 CAP_ED
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27773 chr_4 CAP_ED 497045 498033 + CAP_ED

Synonyms

NCBI ID Ensembl Genomes exon ID
7452591 Thaps27773.2, Thaps27773.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0286

Most Highly Correlated Transcripts

22465

PTZ00169
0.9214

30701

PRK05279
0.9148

32480

AAA_12
0.9145

23550

hypothetical protein
0.9132

40200

TRX_reduct
0.9098

268443

SAICAR_synt_Sc
0.9073

267979

HCO3_cotransp superfamily
0.9059

6952

hypothetical protein
0.9045

1676

hypothetical protein
0.9042

270004

hypothetical protein
0.9024

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 88.1517 1.43E-22 1 - 122 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 88.1517 1.43E-22 1 - 122 superfamily 260155
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 65.6231 7.62E-14 2 - 117 multi-dom 223736

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12655 PHATRDRAFT_12655 208299 183742 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005952 GO:0006468 GO:0008603 GO:0004672 GO:0004682 GO:0004691 GO:0005956 GO:0008605 -

GO:0005952

cAMP-dependent protein kinase complex

Details: 
An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.
GO Category: 
CC

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0008603

cAMP-dependent protein kinase regulator activity

Details: 
Modulation of the activity of the enzyme cAMP-dependent protein kinase.
GO Category: 
MF

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0004682

NA

Details: 
NA
GO Category: 
NA

GO:0004691

cAMP-dependent protein kinase activity

Details: 
Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of cAMP.
GO Category: 
MF

GO:0005956

protein kinase CK2 complex

Details: 
A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
GO Category: 
CC

GO:0008605

NA

Details: 
NA
GO Category: 
NA

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