29075 (ASL) PLN02646
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29075 chr_8 (ASL) PLN02646 94366 96215 + PLN02646

Synonyms

NCBI ID Ensembl Genomes exon ID
7452404 Thaps29075.3, Thaps29075.2, Thaps29075.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0445

Most Highly Correlated Transcripts

11848

hypothetical protein
0.8867

4680

hypothetical protein
0.8753

31150

rpsI
0.8722

31113

Cyt_c_Oxidase_VIb
0.8717

270222

0.8684

750

Sec1
0.8636

42867

Cytochrom_C1
0.8615

36007

Aldolase_II superfamily
0.8613

15142

PT_UbiA_Cox10
0.8607

1533

Nudix_Hydrolase superfamily
0.8603

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL); This group contains ASAL and related proteins.... cl00013 624.185 0 35 - 461 specific 176463
Lyase_I_like superfamily Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and... - 624.185 0 35 - 461 superfamily 260138
PLN02646 argininosuccinate lyase - 822.048 0 1 - 469 multi-dom 215348

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34526 PHATRDRAFT_34526 215156 290505 456474 Cre01.g021251.t1.1 AT5G10920.1 361606

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003824 GO:0004056 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004056

argininosuccinate lyase activity

Details: 
Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine.
GO Category: 
MF

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