31014 AP-4_Mu4_Cterm
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31014 chr_1 AP-4_Mu4_Cterm 2600846 2602449 + AP-4_Mu4_Cterm

Synonyms

NCBI ID Ensembl Genomes exon ID
7445085 Thaps31014.3, Thaps31014.1, Thaps31014.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0175

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0173
 0.35

Most Highly Correlated Transcripts

36592

HMGB-UBF_HMG-box
0.9138

263515

RimL
0.9069

bd1893

(bd1893) NA
0.9062

22248

PLN00162
0.8986

261126

DadA
0.8948

6243

Macro superfamily
0.8919

264314

PLN02605
0.8878

262510

Alg6_Alg8 superfamily
0.8859

4292

hypothetical protein
0.8857

35684

dak_ATP
0.8751

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AP-4_Mu4_Cterm C-terminal domain of medium Mu4 subunit in adaptor protein (AP) complex AP-4; AP complexes... cl10970 448.192 6.79E-157 181 - 452 specific 211364
AP_MHD_Cterm superfamily C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); This... - 448.192 6.79E-157 181 - 452 superfamily 264154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45284 PHATRDRAFT_45284 205144 237302 432880 Cre02.g146600.t1.2 AT4G24550.2 557715

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006886 GO:0030125 -

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0030125

clathrin vesicle coat

Details: 
A clathrin coat found on a vesicle.
GO Category: 
CC

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