3149 GstThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3149	chr_3	Gst	248142	249473	+	Gst

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441726	Thaps3149.1, Thaps3149.3, Thaps3149.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0266

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0039	0.52	1.1 1.5

Most Highly Correlated Transcripts

11371 hypothetical protein 0.9199	5694 hypothetical protein 0.9071	37638 HrpA 0.9061	262617 (Tp_Myb2R7) MYB DNA binding protein/ transcription factor-like protein 0.9058	262025 GH18_chitinase-like superfamily 0.9036	32522 rad3 0.9026
12500 SNF2_N 0.8954	22916 DUF1162 superfamily 0.892	264816 ABC_ATPase superfamily 0.8914	22258 PUB 0.8906

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Gst		Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	-	71.7646	8.05E-15	60 - 243	multi-dom	223698

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	251055	153253	224152	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Glutathione metabolism	map00480

GO Terms

Not available -

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