31764 DUF21
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31764 chr_2 DUF21 1943369 1946017 - DUF21

Synonyms

NCBI ID Ensembl Genomes exon ID
7452331 Thaps31764.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0292

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0196
 0.36

Most Highly Correlated Transcripts

262975

Peptidase_M8 superfamily
0.8194

262858

(IKI3) IKI3
0.8158

8503

DUF2431
0.8065

8680

PseudoU_synth_RluCD_like
0.7993

262303

(Helicase_2) UvrD-helicase
0.7983

6606

obgE
0.7949

262934

hypothetical protein
0.7894

1255

Nic96 superfamily
0.7793

263669

UvrD
0.7707

261910

hypothetical protein
0.7645

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains... cl15354 88.3164 2.35E-20 416 - 534 specific 239963
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 88.3164 2.35E-20 416 - 534 superfamily 265675
DUF21 superfamily Domain of unknown function DUF21; This transmembrane region has no known function. Many of the... - 115.747 3.94E-29 219 - 389 superfamily 250731
DUF21 superfamily Domain of unknown function DUF21; This transmembrane region has no known function. Many of the... - 115.747 3.94E-29 219 - 389 superfamily 250731

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_2037 PHATRDRAFT_2037 173398 254626 461339 Cre17.g719250.t1.1 AT5G52790.1 308753

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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