31907 ipk
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31907 chr_2 ipk 262518 263740 - ipk

Synonyms

NCBI ID Ensembl Genomes exon ID
7452186 Thaps31907.2, Thaps31907.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0081
 0.42

Most Highly Correlated Transcripts

bd1765

(bd1765) NA
0.9464

bd1078

(bd1078) NA
0.9204

bd258

(bd258) HU
0.9178

bd624

(bd624) Glyco_transf_34 superfamily
0.916

bd1154

(bd1154) tpt
0.9094

bd1893

(bd1893) NA
0.897

bd1662

(bd1662) TIGR00367
0.8969

bd463

(bd463) Aa_trans superfamily
0.8966

bd687

(bd687) NA
0.8794

bd218

(bd218) Chloroa_b-bind superfamily
0.8765

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional - 203.471 1.34E-62 60 - 332 multi-dom 234652

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51700 PHATRDRAFT_51700 267640 320923 461009 Cre02.g145050.t1.2 AT2G26930.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0016114 GO:0005524 GO:0016301 GO:0016310 GO:0050515 -

GO:0016114

terpenoid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.
GO Category: 
BP

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016301

kinase activity

Details: 
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
GO Category: 
MF

GO:0016310

phosphorylation

Details: 
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO Category: 
BP

GO:0050515

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity

Details: 
Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol + ATP = 4-CDP-2-C-methyl-D-erythritol 2-phosphate + ADP + 2 H(+).
GO Category: 
MF

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