32525 UBCcThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32525	chr_3	UBCc	1912276	1913001	+	UBCc

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445356	Thaps32525.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0435

Most Highly Correlated Transcripts

10322 hypothetical protein 0.8485	bd409 (bd409) Snf7 superfamily 0.8343	12183 hypothetical protein 0.8302	10027 hypothetical protein 0.8168	bd877 (bd877) NA 0.8159	934 hypothetical protein 0.81
13427 AarF 0.8074	517 (PSA1) proteasome_alpha_type_1 0.8053	32713 DnaJ 0.8008	17468 CK_II_beta 0.7956

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBCc		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	cl00154	97.6581	2.47E-25	4 - 223	specific	238117
UBCc superfamily		Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated...	-	97.6581	2.47E-25	4 - 223	superfamily	260221

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

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