17468 CK_II_beta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17468 chr_4 CK_II_beta 1149195 1150529 + CK_II_beta

Synonyms

NCBI ID Ensembl Genomes exon ID
7453394 Thaps17468.3, Thaps17468.1, Thaps17468.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0251

Most Highly Correlated Transcripts

bd1465

(bd1465) PKc_like superfamily
0.8981

bd446

(bd446) HrpA
0.8968

bd878

(bd878) AAT_like
0.89

261357

NAD_binding_8 superfamily
0.8765

bd392

(bd392) DEXDc
0.8711

33092

RINGv superfamily
0.8678

31737

fabG
0.8674

262580

AdoMet_dc
0.8533

37336

Beach
0.8509

19743

Sm_D3
0.8474

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CK_II_beta Casein kinase II regulatory subunit; Casein kinase II regulatory subunit. cl02099 263.626 9.74E-87 40 - 216 specific 250449
CK_II_beta superfamily Casein kinase II regulatory subunit; Casein kinase II regulatory subunit. - 263.626 9.74E-87 40 - 216 superfamily 261175

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12614 PHATRDRAFT_12614 269003 295906 Not available Not available Not available 310023

KEGG

KEGG description KEGG Pathway
Ribosome biogenesis in eukaryotes map03008

GO Terms

GO:0005956 GO:0008605 -

GO:0005956

protein kinase CK2 complex

Details: 
A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
GO Category: 
CC

GO:0008605

NA

Details: 
NA
GO Category: 
NA

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