3275 TLDc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3275 chr_3 TLDc 556381 558015 - TLDc

Synonyms

NCBI ID Ensembl Genomes exon ID
7444057 Thaps3275.1, Thaps3275.3, Thaps3275.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0003

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0161
 0.36

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9628

bd1841

(bd1841) CAP10 superfamily
0.962

bd410

(bd410) HNHc
0.9122

bd1808

(bd1808) NA
0.9029

bd1786

(bd1786) GLTP superfamily
0.8921

bd885

(bd885) NA
0.8887

bd884

(bd884) NA
0.8796

bd690

(bd690) NA
0.8765

263105

(FCL1) FAA1
0.8667

36297

pepsin_retropepsin_like superfamily
0.8645

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TLDc domain in TBC and LysM domain containing proteins; domain in TBC and LysM domain containing... cl02144 117.808 3.48E-31 265 - 406 specific 214733
TLD superfamily TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&... - 117.808 3.48E-31 265 - 406 superfamily 261195

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT5G06260.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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