32920 UPF0066Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32920	chr_3	UPF0066	1775880	1776986	-	UPF0066

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449558	Thaps32920.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Most Highly Correlated Transcripts

22847 hypothetical protein 0.8838	268486 Glyco_transf_22 superfamily 0.879	6012 hypothetical protein 0.878	21265 hypothetical protein 0.8657	269798 hypothetical protein 0.8643	24632 PDCD2_C superfamily 0.8616
35519 hypothetical protein 0.8613	37156 PLN02369 0.8611	5666 Las1 superfamily 0.8569	21654 hypothetical protein 0.8562

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UPF0066		Escherichia coli YaeB and related proteins; Uncharacterized protein family UPF0066. This domain...	cl00749	134.542	2.65E-38	91 - 227	specific	187753
UPF0066 superfamily		Escherichia coli YaeB and related proteins; Uncharacterized protein family UPF0066. This domain...	-	134.542	2.65E-38	91 - 227	superfamily	260602

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_10437	PHATR_10437	271700	248833	461415	Cre14.g613450.t1.2	AT4G28020.1	487417

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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