34265 FKBP_CThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
34265	chr_5	FKBP_C	1187327	1188038	-	FKBP_C

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450069	Thaps34265.4, Thaps34265.1, Thaps34265.3, Thaps34265.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0008

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0244	0.36	0.00000032 0.014

Most Highly Correlated Transcripts

19977 TRX_family 0.8968	260799 Peptidase_M76 0.8609	36037 Trypsin_2 0.8563	34158 DUF336 superfamily 0.8539	268343 NA 0.8495	37934 GRX_PICOT_like 0.846
36078 PRX5_like 0.8444	16075 tpt 0.8427	26991 GRX_GRXh_1_2_like 0.8391	270222 0.838

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FKBP_C		FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase.	cl19519	105.786	3.87E-30	35 - 128	specific	249719
FKBP_C superfamily		FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase.	-	105.786	3.87E-30	35 - 128	superfamily	267872

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_51271	PHATRDRAFT_51271	172528	301483	445648	Not available	AT5G64350.1	285876

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

Add comment

Log in to post comments