34543 (PPC2) PEPcase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34543 chr_5 (PPC2) PEPcase superfamily 200957 204623 + PEPcase superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0214
 0.34

Most Highly Correlated Transcripts

bd463

(bd463) Aa_trans superfamily
0.9038

bd1893

(bd1893) NA
0.8971

33663

PLN02649
0.8925

bd1765

(bd1765) NA
0.8859

bd467

(bd467) Cytochrome_b_N
0.8852

30851

(CLPC2) clpA
0.8815

bd2073

(bd2073) psbB
0.8794

22863

COG1026
0.8771

37288

PLN02487
0.8739

bd258

(bd258) HU
0.8686

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PEPcase superfamily Phosphoenolpyruvate carboxylase; Phosphoenolpyruvate carboxylase. - 913.07 0 236 - 1018 superfamily 266670

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51136 PHATRDRAFT_51136 Not available 207892 66604 Cre16.g673852.t1.1 AT3G14940.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006099 GO:0008964 -

GO:0006099

tricarboxylic acid cycle

Details: 
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO Category: 
BP

GO:0008964

phosphoenolpyruvate carboxylase activity

Details: 
Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-.
GO Category: 
MF

Add comment

Log in to post comments