34714 nucleoside_deaminase
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34714 chr_6 nucleoside_deaminase 1351139 1352173 + nucleoside_deaminase

Synonyms

NCBI ID Ensembl Genomes exon ID
7453279 Thaps34714.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0190

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0041
 0.50

Most Highly Correlated Transcripts

5318

hypothetical protein
0.8581

268179

DTW superfamily
0.8522

5178

MPN superfamily
0.8513

32314

LSm2
0.8484

7251

hypothetical protein
0.8446

40473

AMMECR1
0.8411

38466

SpoU_methylase superfamily
0.8406

268443

SAICAR_synt_Sc
0.8403

36995

LplA
0.84

262396

Fe_bilin_red superfamily
0.8377

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
nucleoside_deaminase Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn... cl00269 122.34 4.69E-34 129 - 255 specific 238612
cytidine_deaminase-like superfamily Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases... - 122.34 4.69E-34 129 - 255 superfamily 260314

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_7195 PHATRDRAFT_7195 226334 1225 104884 Cre13.g573300.t1.1 AT1G68720.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016787 GO:0003933 GO:0016814 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0003933

GTP cyclohydrolase activity

Details: 
Catalysis of the hydrolysis of the imidazole ring of GTP, releasing formate. Two C-N bonds are hydrolyzed and the pentase unit is isomerized.
GO Category: 
MF

GO:0016814

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

Details: 
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.
GO Category: 
MF

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