40473 AMMECR1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40473 chr_4 AMMECR1 1968432 1969458 + AMMECR1

Synonyms

NCBI ID Ensembl Genomes exon ID
7452202 Thaps40473.1, Thaps40473.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0298

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0097
 0.39

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.8798

267979

HCO3_cotransp superfamily
0.8485

34714

nucleoside_deaminase
0.8411

38466

SpoU_methylase superfamily
0.8399

263682

hypothetical protein
0.8386

4517

hypothetical protein
0.8329

22741

hypothetical protein
0.8308

36007

Aldolase_II superfamily
0.8273

8446

hypothetical protein
0.8232

32064

Mito_carr
0.8224

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AMMECR1 AMMECR1; This family consists of several AMMECR1 as well as several uncharacterized proteins. The... cl00911 164.268 3.51E-50 16 - 210 specific 250929
AMMECR1 superfamily AMMECR1; This family consists of several AMMECR1 as well as several uncharacterized proteins. The... - 164.268 3.51E-50 16 - 210 superfamily 260692

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27534 PHATRDRAFT_27534 142912 190638 74457 Cre03.g146687.t1.1 AT2G38710.2 286451

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments