3486 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3486 chr_3 hypothetical protein 1077561 1079013 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7448772 Thaps3486.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0426

Most Highly Correlated Transcripts

12899

AAA
0.8617

22180

hypothetical protein
0.8541

9017

hypothetical protein
0.8466

2598

FANCE_c-term
0.8409

264556

FBPase
0.8353

16114

PLN02350
0.834

7356

Nudix_Hydrolase superfamily
0.8331

24004

Tfb4 superfamily
0.8311

10398

hypothetical protein
0.8303

1063

hypothetical protein
0.8298

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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