35041 COG1094
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35041 chr_6 COG1094 863970 864749 + COG1094

Synonyms

NCBI ID Ensembl Genomes exon ID
7443620 Thaps35041.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0192
 0.36

Most Highly Correlated Transcripts

36406

Ribosomal_L7_archeal_euk
0.9281

28755

NSA2
0.9272

21363

MRP-S28 superfamily
0.9139

21725

Brix superfamily
0.9129

14597

SrmB
0.9128

18198

RRM_NIFK_like
0.9124

31465

Brix
0.9014

bd1877

(bd1877) NA
0.9

40509

(RL30) Ribosomal_L24e_L24
0.8962

268417

hypothetical protein
0.8943

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG1094 Predicted RNA-binding protein (contains KH domains) [General function prediction only] - 193.276 4.80E-61 76 - 259 multi-dom 224019

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9929 PHATRDRAFT_9929 227411 206037 313654 Cre12.g549700.t1.2 AT3G13230.1 359998

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

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