35318 2A0106
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35318 chr_7 2A0106 1317353 1319047 - 2A0106

Synonyms

NCBI ID Ensembl Genomes exon ID
7447113 Thaps35318.2, Thaps35318.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147

Most Highly Correlated Transcripts

bd730

(bd730) NA
0.8815

bd721

(bd721) NA
0.8447

7174

hypothetical protein
0.831

22784

hypothetical protein
0.83

9353

(Tp_HSF_1c) HSF_DNA-bind superfamily
0.826

24658

DUF605
0.8228

12076

EPL1 superfamily
0.8135

263002

(Tp_HSF_2.7b) regulator [Rayko]
0.8134

23086

hypothetical protein
0.8127

24592

hypothetical protein
0.8097

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 122.808 3.89E-31 97 - 506 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 122.808 3.89E-31 97 - 506 superfamily 119392
2A0106 metabolite-proton symporter; This model represents the metabolite:H+ symport subfamily of the major... - 295.335 2.55E-94 103 - 499 multi-dom 233168

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4981 PHATR_33590 PHATR_33590 148101 265186 246404 Cre06.g273200.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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