35340 DUF3228 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35340	chr_7	DUF3228 superfamily	1834219	1834869	+	DUF3228 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447202	Thaps35340.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0249

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0003	0.47	11000 2

Most Highly Correlated Transcripts

31007 DsbA_FrnE 0.8407	1095 protease_HslV 0.8386	5878 hypothetical protein 0.8377	38802 PHF5 0.8318	24776 LRR_RI superfamily 0.8301	3718 hypothetical protein 0.8297
7794 UPF0054 0.8233	262965 0.8184	7987 hypothetical protein 0.8105	3348 hypothetical protein 0.8064

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF3228 superfamily		Protein of unknown function (DUF3228); This family of proteins has no known function.	-	244.621	9.34E-82	34 - 215	superfamily	151976

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_18808	PHATR_18808	193864	250585	448819	Cre04.g218100.t1.2	Not available	356030

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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