21050 Ras_like_GTPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21050 chr_1 Ras_like_GTPase superfamily 2685378 2687332 + Ras_like_GTPase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452532 Thaps21050.3, Thaps21050.1, Thaps21050.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0193
 0.22

Most Highly Correlated Transcripts

3944

COG0218
0.9481

2921

RRM_SF
0.9359

36434

DUF1253
0.9344

23245

hypothetical protein
0.9302

27873

PLN02274
0.9276

35207

YihA_EngB
0.925

34006

Sun
0.9246

32325

ABC_ATPase superfamily
0.9234

3583

PRK13796
0.9225

268598

COG1094
0.9221

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 93.7788 3.49E-22 331 - 587 superfamily 266525
COG1084 Predicted GTPase [General function prediction only] - 90.8257 3.43E-20 156 - 586 multi-dom 224009

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43105 PHATRDRAFT_43105 196214 325692 202496 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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