3625 FNR_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3625 chr_3 FNR_like superfamily 1392144 1394603 - FNR_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7441934 Thaps3625.3, Thaps3625.1, Thaps3625.4, Thaps3625.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0475

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0158
 0.37

Most Highly Correlated Transcripts

32716

PRK05290
0.8411

5119

MATE_like superfamily
0.8288

9471

SEC-C superfamily
0.8054

11101

TauE
0.7723

269325

(Tp_HSF_2.6c) HSF
0.7712

bd722

(bd722) NA
0.7524

36679

PEMT
0.7512

2010

hypothetical protein
0.7486

25181

hypothetical protein
0.7426

8439

NADB_Rossmann superfamily
0.7402

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 210.593 6.64E-61 393 - 734 superfamily 263080
Flavodoxin_1 Flavodoxin; Flavodoxin. cl00438 96.6865 3.94E-23 110 - 245 specific 249722
FMN_red superfamily NADPH-dependent FMN reductase; NADPH-dependent FMN reductase. - 96.6865 3.94E-23 110 - 245 superfamily 260423
cysJ sulfite reductase [NADPH] flavoprotein, alpha-component; This model describes an NADPH-dependent... - 187.22 5.80E-51 76 - 733 multi-dom 233643

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45758 PHATRDRAFT_45758 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0016491 GO:0010181 GO:0003958 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0010181

FMN binding

Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
GO Category: 
MF

GO:0003958

NADPH-hemoprotein reductase activity

Details: 
Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.
GO Category: 
MF

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