36609 PRK00142Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
36609	chr_11a	PRK00142	234213	236849	+	PRK00142

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448285	Thaps36609.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0220

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0272	0.25	4.6 32

Most Highly Correlated Transcripts

36798 S_TKc 0.9086	37786 SrmB 0.9029	bd1515 (bd1515) Adenylsuccinate_lyase_2 0.8936	13578 SrmB 0.89	12971 WD40 superfamily 0.8892	17657 HSR1_MMR1 0.889
bd1876 (bd1876) NatB_MDM20 superfamily 0.8888	10053 hypothetical protein 0.8756	39812 Sun 0.8749	262722 DEXDc superfamily 0.8721

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RHOD superfamily		Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese...	-	87.635	2.90E-20	504 - 599	superfamily	260205
PRK00142		putative rhodanese-related sulfurtransferase; Provisional	-	211.63	1.10E-61	359 - 683	multi-dom	234663

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50174	PHATRDRAFT_50174	159704	319960	240751	Not available	Not available	308815

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003676 -

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