36738 PT_UbiA_COQ2
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36738 chr_11a PT_UbiA_COQ2 688316 689983 + PT_UbiA_COQ2
NCBI ID Ensembl Genomes exon ID
7444490 Thaps36738.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0293
Bromodomain superfamily
0.8579
PRP8
0.8543
START
0.8472
TFIIS_M
0.8456
YSH1
0.8448
hypothetical protein
0.8446
DECH_helic
0.8445
RRM
0.8421
PLN02818
0.8383
hypothetical protein
0.8377
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PT_UbiA_COQ2 4-Hydroxybenzoate polyprenyltransferase; 4-Hydroxybenzoate polyprenyltransferase, also known as... cl00337 351.769 1.21E-117 269 - 550 specific 260122
PT_UbiA superfamily UbiA family of prenyltransferases (PTases); Many characterized members of the UbiA... - 351.769 1.21E-117 269 - 550 superfamily 260365
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12269 PHATRDRAFT_12269 179175 234452 45902 Cre06.g291800.t1.2 AT4G23660.2 309938
KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110
GO:0004659 GO:0016021 GO:0009058 GO:0004660 GO:0004661 GO:0004662 GO:0004663 GO:0008318 GO:0008412 GO:0008495 GO:0046428 -

prenyltransferase activity

Details: 
Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

protein farnesyltransferase activity

Details: 
Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.
GO Category: 
MF

protein geranylgeranyltransferase activity

Details: 
Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.
GO Category: 
MF

CAAX-protein geranylgeranyltransferase activity

Details: 
Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families.
GO Category: 
MF

Rab geranylgeranyltransferase activity

Details: 
Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family.
GO Category: 
MF

protein prenyltransferase activity

Details: 
Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.
GO Category: 
MF

4-hydroxybenzoate octaprenyltransferase activity

Details: 
Catalysis of the reaction: farnesylfarnesylgeranyl diphosphate + p-hydroxybenzoate = 3-octaprenyl-4-hydroxybenzoate + diphosphate.
GO Category: 
MF

protoheme IX farnesyltransferase activity

Details: 
Catalysis of the reaction: protoheme IX + (2E,6E)-farnesyl diphosphate + H2O = heme o + diphosphate.
GO Category: 
MF

1,4-dihydroxy-2-naphthoate octaprenyltransferase activity

Details: 
Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + polyprenylpyrophosphate = dimethylmenaquinone + diphosphate + CO2.
GO Category: 
MF
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