37637 ABCG_PDR_domain2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37637 chr_15 ABCG_PDR_domain2 224173 226852 - ABCG_PDR_domain2

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0132

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0011
 0.46

Most Highly Correlated Transcripts

9148

hypothetical protein
0.8574

bd1161

(bd1161) NA
0.856

bd837

(bd837) NA
0.8442

bd634

(bd634) NA
0.8368

11613

hypothetical protein
0.8288

11135

NCA2 superfamily
0.8239

bd1216

(bd1216) Delta6-FADS-like
0.8238

10695

EVE superfamily
0.8231

7584

pepsin_like
0.8192

3331

Bac_rhamnosid superfamily
0.8112

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCG_PDR_domain2 Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette... cl17201 285.291 8.50E-91 225 - 465 specific 213199
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 285.291 8.50E-91 225 - 465 superfamily 266551
SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] - 102.587 2.38E-24 239 - 459 multi-dom 224059

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21664 PHATRDRAFT_21664 259799 182647 436498 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

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