37920 cyclophilin_ABH_likeThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
37920	chr_17	cyclophilin_ABH_like	474055	475323	-	cyclophilin_ABH_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442139	Thaps37920.5, Thaps37920.1, Thaps37920.7, Thaps37920.6, Thaps37920.3, Thaps37920.2, Thaps37920.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0217

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0274	0.39	0.0012 6

Most Highly Correlated Transcripts

37934 GRX_PICOT_like 0.9397	30701 PRK05279 0.9368	262994 COG0637 0.928	39141 RHOD superfamily 0.9234	41655 Chloroa_b-bind 0.9224	33075 RimI 0.9197
22673 NA 0.9164	36879 BolA 0.9163	261982 (ACB1) ACBP 0.9158	18462 EMP24_GP25L 0.915

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
cyclophilin_ABH_like		cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans...	cl00197	314.965	1.42E-110	6 - 171	specific	238907
cyclophilin superfamily		cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic...	-	314.965	1.42E-110	6 - 171	superfamily	260252

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_18274	PHATRDRAFT_18274	230414	196049	75296	Cre01.g002300.t1.2	AT2G16600.1	285045

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

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