262854 CBS_pair superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262854	chr_6	CBS_pair superfamily	919883	921546	-	CBS_pair superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445940	Thaps262854.2, Thaps262854.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0088

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0033	0.48	0.000000021 0.013

Most Highly Correlated Transcripts

37960 (MYO5) MYSc 0.9557	32840 Motor_domain superfamily 0.9394	263191 PLN03076 0.9389	15537 KISc 0.937	33225 MYSc 0.9362	27435 PAH 0.9357
262697 hypothetical protein 0.9321	262607 WD40 superfamily 0.9303	35501 HELICc 0.9296	596 Adaptin_N 0.9287

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CBS_pair superfamily		The CBS domain, named after human CBS, is a small domain originally identified in cystathionine...	-	122.34	1.07E-33	294 - 397	superfamily	265675
CBS_pair superfamily		The CBS domain, named after human CBS, is a small domain originally identified in cystathionine...	-	122.34	1.07E-33	294 - 397	superfamily	265675

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	251736	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments