38428 (AOX1_2) AOX
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38428 chr_20 (AOX1_2) AOX 706135 707254 - AOX

Synonyms

NCBI ID Ensembl Genomes exon ID
7443638 Thaps38428.2, Thaps38428.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0420

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0119
 0.42

Most Highly Correlated Transcripts

bd1840

(bd1840) NA
0.9251

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9094

bd1841

(bd1841) CAP10 superfamily
0.9031

bd1934

(bd1934) NA
0.8961

bd1756

(bd1756) NA
0.8891

bd1839

(bd1839) NA
0.8731

13308

PLN02948
0.8683

bd690

(bd690) NA
0.8679

bd877

(bd877) NA
0.8671

8861

PRK11752
0.8577

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AOX Alternative oxidase, ferritin-like diiron-binding domain; Alternative oxidase (AOX) is a... cl00264 248.276 1.33E-81 132 - 305 specific 153112
Ferritin_like superfamily Ferritin-like superfamily of diiron-containing four-helix-bundle proteins; Ferritin-like, diiron-... - 248.276 1.33E-81 132 - 305 superfamily 260311

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre09.g395950.t1.2 AT3G27620.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005740 GO:0007585 GO:0016491 GO:0051341 -

GO:0005740

mitochondrial envelope

Details: 
The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space.
GO Category: 
CC

GO:0007585

respiratory gaseous exchange

Details: 
The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0051341

regulation of oxidoreductase activity

Details: 
Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
BP

Add comment

Log in to post comments