38602 Ndh
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38602 chr_22 Ndh 728573 730339 - Ndh

Synonyms

NCBI ID Ensembl Genomes exon ID
7448217 Thaps38602.1, Thaps38602.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0123
 0.31

Most Highly Correlated Transcripts

6140

hypothetical protein
0.9061

6066

APG6
0.9031

3071

NA
0.8934

10889

hypothetical protein
0.8909

10059

hypothetical protein
0.8905

37793

hypothetical protein
0.8881

2515

nst superfamily
0.8874

2578

hypothetical protein
0.8854

21722

Aldo_ket_red
0.8828

29322

AAT_I superfamily
0.8789

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] - 249.089 2.19E-76 68 - 516 multi-dom 224172

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 66303 461368 Cre16.g671000.t1.2 AT5G08740.1 Not available

KEGG

KEGG description KEGG Pathway
Oxidative phosphorylation map00190

GO Terms

GO:0006118 GO:0016491 GO:0015036 GO:0003954 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0015036

disulfide oxidoreductase activity

Details: 
Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
GO Category: 
MF

GO:0003954

NADH dehydrogenase activity

Details: 
Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.
GO Category: 
MF

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