38789 ArsB_NhaD_permease superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38789 chr_23 ArsB_NhaD_permease superfamily 109624 112838 - ArsB_NhaD_permease superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448273 Thaps38789.3, Thaps38789.2, Thaps38789.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0193

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

12836

EEP superfamily
0.8996

261512

MCM
0.8782

20865

DUF1162 superfamily
0.8738

21268

zf-CXXC
0.8686

268346

hypothetical protein
0.8637

16613

S_TKc
0.8592

21546

hypothetical protein
0.8534

24233

DUF1620
0.8513

262371

AAA_12 superfamily
0.8509

1216

hypothetical protein
0.8495

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArsB_NhaD_permease superfamily Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate,... - 95.3445 2.18E-21 42 - 238 superfamily 266565
ArsB_NhaD_permease superfamily Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate,... - 95.3445 2.18E-21 42 - 238 superfamily 266565
CitT Di- and tricarboxylate transporters [Inorganic ion transport and metabolism] - 81.2142 1.74E-16 352 - 639 multi-dom 223547

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14922 PHATRDRAFT_14922 Not available Not available 457537 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005978 GO:0006813 GO:0008324 -

GO:0005978

glycogen biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.
GO Category: 
BP

GO:0006813

potassium ion transport

Details: 
The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008324

cation transmembrane transporter activity

Details: 
Catalysis of the transfer of cation from one side of the membrane to the other.
GO Category: 
MF

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