39149 PRK05218
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39149 chr_1 PRK05218 1648466 1651376 - PRK05218

Synonyms

NCBI ID Ensembl Genomes exon ID
7445145 Thaps39149.2, Thaps39149.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0111

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0263
 0.34

Most Highly Correlated Transcripts

268062

PRK14293
0.8925

31751

PKCI_related
0.8755

38071

COG2220
0.8635

9460

hypothetical protein
0.8559

28443

(RL10) Ribosomal_L16_L10e
0.8555

21965

PDI_a_ERp38
0.8553

41169

PqqL
0.8551

262540

COG0523
0.8519

21098

Rhomboid
0.8511

39864

DEXDc superfamily
0.8492

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSP90 superfamily Hsp90 protein; Hsp90 protein. - 238.9 1.76E-69 288 - 748 superfamily 249661
PRK05218 heat shock protein 90; Provisional - 676.831 0 85 - 729 multi-dom 235366

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_18793 PHATR_18793 197575 251099 448346 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0051082 GO:0005524 GO:0003763 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0051082

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0003763

NA

Details: 
NA
GO Category: 
NA

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