41169 PqqL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41169 chr_6 PqqL 1590383 1591856 - PqqL

Synonyms

NCBI ID Ensembl Genomes exon ID
7442766 Thaps41169.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0111

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0291
 0.48

Most Highly Correlated Transcripts

268062

PRK14293
0.8794

39864

DEXDc superfamily
0.8764

39941

PRK13357
0.8574

39149

PRK05218
0.8551

21098

Rhomboid
0.8477

25386

hypothetical protein
0.8436

24527

TIP49
0.84

261823

FIG superfamily
0.8353

21193

UBL
0.8347

38071

COG2220
0.8317

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M16 superfamily Insulinase (Peptidase family M16); Insulinase (Peptidase family M16). - 201.385 3.03E-62 60 - 208 superfamily 250047
Peptidase_M16 superfamily Insulinase (Peptidase family M16); Insulinase (Peptidase family M16). - 201.385 3.03E-62 60 - 208 superfamily 250047
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 119.888 8.43E-32 213 - 400 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 119.888 8.43E-32 213 - 400 superfamily 253075
PqqL Predicted Zn-dependent peptidases [General function prediction only] - 285.123 2.01E-90 41 - 474 multi-dom 223685

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20787 PHATRDRAFT_20787 170828 295766 438040 Cre12.g523850.t1.2 AT3G02090.1 545625

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0004240 GO:0017087 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004240

NA

Details: 
NA
GO Category: 
NA

GO:0017087

mitochondrial processing peptidase complex

Details: 
A protein complex that consists of a catalytic alpha subunit (alpha-MPP) and a regulatory beta subunit (beta-MPP), and catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.
GO Category: 
CC

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