39946 (AMS2) PTZ00104
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39946 chr_3 (AMS2) PTZ00104 1268058 1269532 - PTZ00104

Synonyms

NCBI ID Ensembl Genomes exon ID
7451712 Thaps39946.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0239

Most Highly Correlated Transcripts

7569

hypothetical protein
0.9188

36007

Aldolase_II superfamily
0.9174

42652

DRG
0.909

19158

GRX_PICOT_like
0.9082

268443

SAICAR_synt_Sc
0.8929

7929

hypothetical protein
0.8929

5806

TIM_phosphate_binding superfamily
0.8917

261823

FIG superfamily
0.8907

55

hypothetical protein
0.8864

22186

MFS
0.8859

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S-AdoMet_synt_C superfamily S-adenosylmethionine synthetase, C-terminal domain; The three domains of S-adenosylmethionine... - 209.185 1.09E-65 302 - 443 superfamily 111646
S-AdoMet_synt_M superfamily S-adenosylmethionine synthetase, central domain; The three domains of S-adenosylmethionine... - 200.732 1.01E-62 177 - 300 superfamily 251520
S-AdoMet_synt_M superfamily S-adenosylmethionine synthetase, central domain; The three domains of S-adenosylmethionine... - 200.732 1.01E-62 177 - 300 superfamily 251520
S-AdoMet_synt_N superfamily S-adenosylmethionine synthetase, N-terminal domain; The three domains of S-adenosylmethionine... - 186.526 1.55E-57 66 - 165 superfamily 249858
S-AdoMet_synt_N superfamily S-adenosylmethionine synthetase, N-terminal domain; The three domains of S-adenosylmethionine... - 186.526 1.55E-57 66 - 165 superfamily 249858
PTZ00104 S-adenosylmethionine synthase; Provisional - 652.853 0 66 - 448 multi-dom 240268

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd913 PHATRDRAFT_bd913 206912 319056 Not available Cre06.g250200.t1.2 AT4G01850.2 285996

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004478 GO:0005524 GO:0006730 GO:0048269 GO:0048270 -

GO:0004478

methionine adenosyltransferase activity

Details: 
Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006730

one-carbon metabolic process

Details: 
The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.
GO Category: 
BP

GO:0048269

methionine adenosyltransferase complex

Details: 
A multimeric enzyme complex composed of variable numbers of catalytic alpha subunits, and noncatalytic beta subunits. The beta subunits are believed to have a regulatory function. The enzyme complex catalyzes the synthesis of S-adenosylmethionine (AdoMet), which is the major methyl group donor, participating in the methylation of proteins, DNA, RNA, phospholipids, and other small molecules.
GO Category: 
CC

GO:0048270

methionine adenosyltransferase regulator activity

Details: 
Modulates the activity of methionine adenosyltransferase.
GO Category: 
MF

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