40044 (MAP1) PLN03158
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40044 chr_3 (MAP1) PLN03158 1833133 1834556 - PLN03158

Synonyms

NCBI ID Ensembl Genomes exon ID
7449569 Thaps40044.2, Thaps40044.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0069
 0.35

Most Highly Correlated Transcripts

bd96

(bd96) eIF-3_zeta
0.9172

37156

PLN02369
0.902

21305

hypothetical protein
0.8906

262457

60KD_IMP
0.8902

bd1807

(bd1807) RRS1 superfamily
0.8899

23887

hypothetical protein
0.8887

263872

PRK14329
0.8852

22163

hypothetical protein
0.8843

bd1945

(bd1945) NA
0.8841

268136

COG1054
0.884

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M... cl00279 378.374 2.77E-130 179 - 414 specific 238519
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 378.374 2.77E-130 179 - 414 superfamily 260321
PLN03158 methionine aminopeptidase; Provisional - 482.415 1.07E-168 28 - 423 multi-dom 215607

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12595 PHATRDRAFT_12595 182191 252633 42070 Cre06.g279750.t1.2 AT2G45240.1 359646

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008235 GO:0004239 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008235

metalloexopeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004239

NA

Details: 
NA
GO Category: 
NA

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