40445 Dynein_heavy superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40445 chr_4 Dynein_heavy superfamily 1814460 1827862 + Dynein_heavy superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443758 Thaps40445.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0474

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0095
 0.37

Most Highly Correlated Transcripts

23894

hypothetical protein
0.8849

269496

(Tp_TAZ3_PHD1) KAT11 superfamily
0.8571

24827

CHD
0.8383

23334

hypothetical protein
0.837

24753

C2
0.8365

8258

CHD
0.831

9790

hypothetical protein
0.8275

11897

DUF1800 superfamily
0.8272

25435

hypothetical protein
0.8234

22442

CHD
0.8232

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Dynein_heavy superfamily Dynein heavy chain and region D6 of dynein motor; This family represents the C-terminal region of... - 798.445 0 3733 - 4443 superfamily 251681
DHC_N1 superfamily Dynein heavy chain, N-terminal region 1; Dynein heavy chains interact with other heavy chains to... - 474.847 4.74E-147 114 - 686 superfamily 254766
DHC_N1 superfamily Dynein heavy chain, N-terminal region 1; Dynein heavy chains interact with other heavy chains to... - 474.847 4.74E-147 114 - 686 superfamily 254766
DHC_N2 superfamily Dynein heavy chain, N-terminal region 2; Dyneins are described as motor proteins of eukaryotic... - 356.507 2.40E-108 1192 - 1606 superfamily 254773
DHC_N2 superfamily Dynein heavy chain, N-terminal region 2; Dyneins are described as motor proteins of eukaryotic... - 356.507 2.40E-108 1192 - 1606 superfamily 254773
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 336.591 5.47E-104 1741 - 1992 superfamily 267297
AAA_8 superfamily P-loop containing dynein motor region D4; The 380 kDa motor unit of dynein belongs to the AAA class... - 333.838 2.02E-102 2731 - 2999 superfamily 193256
AAA_9 superfamily ATP-binding dynein motor region D5; The 380 kDa motor unit of dynein belongs to the AAA class of... - 260.303 1.60E-77 3369 - 3598 superfamily 193257
AAA_7 superfamily P-loop containing dynein motor region D3; the 380 kDa motor unit of dynein belongs to the AAA class... - 250.623 1.88E-73 2386 - 2653 superfamily 193251
MT superfamily Microtubule-binding stalk of dynein motor; the 380 kDa motor unit of dynein belongs to the AAA... - 236.857 9.11E-68 3011 - 3349 superfamily 193253

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 263618 Not available Not available Cre16.g685450.t1.1 Not available 349562

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0003777 GO:0007018 GO:0030286 GO:0008567 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0003777

microtubule motor activity

Details: 
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO Category: 
MF

GO:0007018

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

GO:0030286

dynein complex

Details: 
Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.
GO Category: 
CC

GO:0008567

NA

Details: 
NA
GO Category: 
NA

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