41505 NAD_binding_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41505 chr_8 NAD_binding_8 superfamily 339459 342094 - NAD_binding_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445553 Thaps41505.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0379

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0084
 0.43

Most Highly Correlated Transcripts

24655

hypothetical protein
0.9118

262616

(MYB22)
0.8972

264090

AAA_12
0.88

22141

hypothetical protein
0.8769

4467

hypothetical protein
0.8727

8762

SNF2_N
0.8709

24094

hypothetical protein
0.8709

21568

hypothetical protein
0.8681

20666

RabGAP-TBC
0.8641

5689

HA
0.862

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 74.1213 2.27E-16 421 - 482 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 74.1213 2.27E-16 421 - 482 superfamily 238008
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 120.842 8.00E-30 31 - 357 superfamily 267487
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 58.9344 3.81E-11 427 - 482 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_1129 PHATRDRAFT_1129 276098 237385 455603 Cre13.g577450.t1.1 AT3G10370.1 540164

KEGG

KEGG description KEGG Pathway
Glycerophospholipid metabolism map00564

GO Terms

GO:0005509 GO:0006118 GO:0016491 GO:0004368 GO:0009331 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004368

glycerol-3-phosphate dehydrogenase activity

Details: 
Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.
GO Category: 
MF

GO:0009331

glycerol-3-phosphate dehydrogenase complex

Details: 
An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate.
GO Category: 
CC

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