41566 LbetaH superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41566 chr_8 LbetaH superfamily 662767 663484 + LbetaH superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452813 Thaps41566.2, Thaps41566.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0106

Most Highly Correlated Transcripts

8879

PKc
0.8436

24387

vWFA superfamily
0.8325

6797

hypothetical protein
0.8324

15328

Solute_trans_a
0.831

20292

DPM3 superfamily
0.8269

9258

HP_PGM_like
0.8266

5198

ClpS
0.8227

37409

vWFA superfamily
0.8202

263035

HP_PGM_like
0.8186

11664

DUF3510
0.8185

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LbetaH superfamily Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each... - 166.621 3.28E-52 10 - 169 superfamily 260227

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15160 PHATRDRAFT_15160 162502 321377 Not available Not available Not available 354791

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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