42152 WD40
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
42152 chr_12 WD40 1061037 1062862 + WD40
NCBI ID Ensembl Genomes exon ID
7448037 Thaps42152.1, Thaps42152.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0223
Normalized Mean Residue
Thaps_bicluster_0230
0.24
(bd1667) Mpp10
0.944
MdlB
0.9319
dimethyladenosine transferase
0.9286
RRN3 superfamily
0.9255
hypothetical protein
0.9235
hypothetical protein
0.9221
NSA2
0.9166
Aldo_ket_red
0.9148
SrmB
0.9144
MIF4G
0.9138
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 233.381 1.48E-71 188 - 578 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 233.381 1.48E-71 188 - 578 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 174.507 5.26E-48 189 - 578 multi-dom 225201
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22868 PHATRDRAFT_22868 171300 47746 427427 Cre01.g000600.t1.2 AT5G52820.1 551325
KEGG description KEGG Pathway
Not available Not available
GO:0004871 GO:0005834 GO:0007186 GO:0003847 -

signal transducer activity

Details: 
Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO Category: 
MF

heterotrimeric G-protein complex

Details: 
Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein.
GO Category: 
CC

G-protein coupled receptor signaling pathway

Details: 
A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription.
GO Category: 
BP

1-alkyl-2-acetylglycerophosphocholine esterase activity

Details: 
Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate.
GO Category: 
MF
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