43120 PDI_a_family
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
43120 chr_23 PDI_a_family 229747 232040 - PDI_a_family

Synonyms

NCBI ID Ensembl Genomes exon ID
7442651 Thaps43120.3, Thaps43120.2, Thaps43120.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0163
 0.38

Most Highly Correlated Transcripts

268157

DnaJ
0.8733

24932

Thioredoxin_like superfamily
0.8626

25861

TPR
0.8626

268592

VDE superfamily
0.8617

261608

PLN02585
0.8562

38724

plant_peroxidase_like superfamily
0.8457

574

PRK05444
0.8454

24343

hypothetical protein
0.8411

22963

WD40 superfamily
0.8374

1788

hypothetical protein
0.836

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic... cl00388 111.163 1.50E-29 153 - 254 specific 239259
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 111.163 1.50E-29 153 - 254 superfamily 260398
COPIIcoated_ERV superfamily Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans... - 106.615 1.39E-26 293 - 480 superfamily 254553
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 97.177 2.28E-24 15 - 107 superfamily 258122
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 97.177 2.28E-24 15 - 107 superfamily 258122

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
5623 PHATRDRAFT_14990 PHATRDRAFT_14990 223660 231713 363806 Cre02.g104350.t1.2 Not available 319561

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0003756 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0003756

protein disulfide isomerase activity

Details: 
Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.
GO Category: 
MF

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