454 PRK09601
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
454 chr_5 PRK09601 574339 575697 + PRK09601

Synonyms

NCBI ID Ensembl Genomes exon ID
7451775 Thaps454.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0140
 0.29

Most Highly Correlated Transcripts

37934

GRX_PICOT_like
0.9255

261400

NA
0.9048

22673

NA
0.8972

36037

Trypsin_2
0.8962

35401

COG0523
0.8819

7886

hypothetical protein
0.8807

9459

Thioredoxin_like superfamily
0.8804

4829

hypothetical protein
0.8797

25040

NA
0.8787

11575

hypothetical protein
0.8784

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 295.522 4.15E-97 81 - 292 superfamily 266525
PRK09601 GTP-binding protein YchF; Reviewed - 326.252 8.99E-108 74 - 426 multi-dom 236583

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38559 PHATRDRAFT_38559 184255 215043 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 GO:0005554 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0005554

NA

Details: 
NA
GO Category: 
NA

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