5130 COG0790
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5130 chr_5 COG0790 424744 425913 + COG0790

Synonyms

NCBI ID Ensembl Genomes exon ID
7451752 Thaps5130.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0328

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0192
 0.36

Most Highly Correlated Transcripts

bd1709

(bd1709) NA
0.916

bd1667

(bd1667) Mpp10
0.892

bd524

(bd524) NA
0.8756

bd1877

(bd1877) NA
0.8702

10796

hypothetical protein
0.8604

32395

RNA_pol
0.8602

33682

(Tp_sigma70.3a) Sig70-cyanoRpoD
0.8502

bd96

(bd96) eIF-3_zeta
0.8487

39286

Uup
0.8422

26366

Mito_carr
0.8395

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] - 81.6291 8.40E-18 195 - 369 multi-dom 223861

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32877 PHATRDRAFT_32877 269422 318278 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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