Thaps_hclust_0328 Hierarchical Clustering
Thalassiosira pseudonana

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006096 glycolysis 0.0000000377 0.000138118 Thaps_hclust_0328
GO:0006006 glucose metabolism 0.0285957 1 Thaps_hclust_0328
GO:0006352 transcription initiation 0.0370252 1 Thaps_hclust_0328
GO:0008152 metabolism 0.107438 1 Thaps_hclust_0328
GO:0006511 ubiquitin-dependent protein catabolism 0.138083 1 Thaps_hclust_0328
GO:0006412 protein biosynthesis 0.387111 1 Thaps_hclust_0328
GO:0006810 transport 0.419404 1 Thaps_hclust_0328
GO:0006355 regulation of transcription, DNA-dependent 0.6012 1 Thaps_hclust_0328

Members

2173 : hypothetical protein
10796 : hypothetical protein
26874 : CLPTM1 superfamily
38957 : 2-oxoacid_dh
3101 : hypothetical protein
19928 : (RL20) Ribosomal_L20
27850 : (PGAM2) HP_PGM_like
40391 : (ENO1) PLN00191
3305 : hypothetical protein
21910 : hypothetical protein
28239 : PLN02272
40393 : (PYK1) PLN02461
5130 : COG0790
22345 : (PYK2) PLN02461
32758 : Ntn_hydrolase superfamily
261078 : Na_H_Exchanger
8144 : hypothetical protein
23347 : hypothetical protein
33682 : (Tp_sigma70.3a) Sig70-cyanoRpoD
269065 : Methyltransf_4 superfamily
8521 : PseudoU_synth superfamily
26366 : Mito_carr
36539 : hypothetical protein

Conditions

Condition Condition Difference FDR
diel_light_vs_dark diel_light_vs_dark -0.669 0.000485
lowFe_KTKB_Day3 lowFe_KTKB_Day3 0.236 0.302
lowFe_KTKB_Day5 lowFe_KTKB_Day5 0.502 0.00741
BaP BaP -0.034 0.898
exponential_vs_stationary_24highlight exponential_vs_stationary_24highlight -0.310 0.000926
co2_elevated_stat_arrays co2_elevated_stat_arrays 0.709 0.000658
lowtemp_TMEVA lowtemp_TMEVA 1.360 0.000735
highpH_TMEVA highpH_TMEVA -0.285 0.0524
co2_elevated_expo_arrays co2_elevated_expo_arrays 0.087 0.768
lowFe_TMEVA lowFe_TMEVA -0.179 0.534
exponential_vs_stationary_24light exponential_vs_stationary_24light -0.918 0.000581
lowN_TMEVA lowN_TMEVA 1.840 0.00119
diel_exponential_vs_stationary diel_exponential_vs_stationary -1.060 0.000602
lowSi_TMEVA lowSi_TMEVA -0.346 0.574
highlight_arrays highlight_arrays 0.166 0.276

Motifs

MEME Output