5415 Thioredoxin_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5415	chr_5	Thioredoxin_like superfamily	1149567	1151337	+	Thioredoxin_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453164	Thaps5415.2, Thaps5415.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0024

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0224	0.27	0.00001 49

Most Highly Correlated Transcripts

25601 hypothetical protein 0.9412	268908 Trans_IPPS_HH 0.9195	268773 Gst 0.9157	261422 (MAP4) MetAP1 0.9115	268592 VDE superfamily 0.9083	5135 Rubis-subs-bind 0.9075
16295 FBPase 0.9016	36235 p450 superfamily 0.8994	16737 Mito_carr 0.897	35684 dak_ATP 0.8934

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GRX_family		Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a...	cl00388	62.8698	2.57E-12	460 - 531	specific	239017
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	102.043	3.98E-26	312 - 398	superfamily	260398
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	102.043	3.98E-26	312 - 398	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	144870	256775	61162	Cre06.g261500.t1.2	AT4G10000.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 GO:0045454 -

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