5576 DUF1499 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5576 chr_5 DUF1499 superfamily 1555329 1555938 - DUF1499 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448159 Thaps5576.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0225
 0.26

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.8764

270251

(NTT4) hypothetical protein
0.8756

bd841

(bd841) Abhydrolase_6
0.8707

bd624

(bd624) Glyco_transf_34 superfamily
0.86

33663

PLN02649
0.8373

270242

(PsbM) photosystem II reaction center M protein, plastid precursor
0.8364

bd1161

(bd1161) NA
0.8362

33000

FTHFS
0.8331

25787

hypothetical protein
0.8323

6759

hypothetical protein
0.8299

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1499 superfamily Protein of unknown function (DUF1499); This family consists of several hypothetical bacterial and... - 63.7809 1.24E-13 67 - 187 superfamily 261091

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48250 PHATRDRAFT_48250 273333 312267 194356 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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