5689 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5689 chr_5 HA 1831750 1833949 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7444862 Thaps5689.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Most Highly Correlated Transcripts

6922

hypothetical protein
0.9225

262616

(MYB22)
0.9193

22928

hypothetical protein
0.9164

22688

hypothetical protein
0.9143

23979

zf-HC5HC2H superfamily
0.9053

268194

(Tp_Myb4R1b) SANT
0.9013

21568

hypothetical protein
0.8974

10934

Adenylation_DNA_ligase_like superfamily
0.8956

268872

SET
0.8949

6068

KH-I
0.8921

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 59.2413 6.45E-11 477 - 537 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 59.2413 6.45E-11 477 - 537 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

Add comment

Log in to post comments