5898 Nucleotid_trans superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5898	chr_6	Nucleotid_trans superfamily	192947	195134	+	Nucleotid_trans superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448379	Thaps5898.4, Thaps5898.2, Thaps5898.1, Thaps5898.5, Thaps5898.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0134

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0014	0.46	2.6 6.6

Most Highly Correlated Transcripts

263917 0.8584	bd392 (bd392) DEXDc 0.8566	4108 hypothetical protein 0.8521	12836 EEP superfamily 0.851	37607 ECM4 0.8493	11438 hypothetical protein 0.8461
bd789 (bd789) ABC_ATPase superfamily 0.8426	33454 Ac_CoA_lig_AcsA 0.839	bd446 (bd446) HrpA 0.838	bd624 (bd624) Glyco_transf_34 superfamily 0.833

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nucleotid_trans superfamily		Nucleotide-diphospho-sugar transferase; Proteins in this family have been been predicted to be...	-	88.922	4.00E-20	370 - 584	superfamily	251929

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	116858	Not available	AT1G70630.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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