6043 NADB_Rossmann superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6043	chr_6	NADB_Rossmann superfamily	559894	561420	+	NADB_Rossmann superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448578	Thaps6043.2, Thaps6043.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0024	0.39

Most Highly Correlated Transcripts

7140 Ifi-6-16 0.892	261400 NA 0.8894	21877 hypothetical protein 0.8887	262363 hypothetical protein 0.8856	16295 FBPase 0.8837	5958 hypothetical protein 0.8756
13448 Sec1 0.8737	9247 hypothetical protein 0.8711	19764 MPC superfamily 0.8671	10894 hypothetical protein 0.8664

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	95.5935	7.29E-22	15 - 191	superfamily	263925

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	224855	Not available	453490	Not available	AT5G39410.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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