6558 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6558 chr_6 hypothetical protein 1885337 1888615 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7446350 Thaps6558.3, Thaps6558.1, Thaps6558.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0397

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0264
 0.37

Most Highly Correlated Transcripts

262157

E1_like_apg7
0.8941

36337

Vps35 superfamily
0.8928

263610

COG3899
0.8917

4445

hypothetical protein
0.8854

bd706

(bd706) NA
0.8827

263599

COG3899
0.8785

21411

hypothetical protein
0.8775

4726

hypothetical protein
0.8759

20907

hypothetical protein
0.8756

25224

ATG13 superfamily
0.871

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47933 PHATRDRAFT_47933 269857 189730 Not available Not available AT4G25230.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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